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| 23. |  | HIRIGOYEN, A.; ACOSTA-MUÑOZ, C.; SALAMANCA, A.J.A.; VARO-MARTINEZ, M.Á.; RACHID, C.; FRANCO, J.; NAVARRO-CERRILLO, R. A machine learning approach to model leaf area index in Eucalyptus plantations using high-resolution satellite imagery and airborne laser scanner data. Annals of Forest Research, 2021, Volume 64, Issue 2, Pages 165-183. OPEN ACCESS. doi: https://doi.org/10.15287/afr.2021.2073 Article history: Received October 27, 2020; Revised December 14, 2021; Accepted December 21, 2021.
Corresponding author: Hirigoyen, A.; National Institute of Agricultural Research (INIA), Tacuarembó, Uruguay; email:ahirigoyen@inia.org.uy...| Biblioteca(s): INIA Las Brujas. |
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| 24. | | HIRIGOYEN, A.; ACUNA. M.; RACHID, C.; FRANCO, J.; NAVARRO-CERRILLO, R. Use of optimization modeling to assess the effect of timber and carbon pricing on harvest scheduling, carbon sequestration, and net present value of eucalyptus plantations. Forests, 2021, Volume 12, Issue 6, Article number 651. OPEN ACCESS. Doi: https://doi.org/10.3390/f12060651 Article history: Received 21 March 2021; Revised 10 May 2021; Accepted 12 May 2021; Published: 21 May 2021.
Academic Editor: Luis Diaz-Balteiro.
The authors thank the Instituto Nacional de Investigaciones Agropecuarias (INIA-Uruguay) for...| Biblioteca(s): INIA Las Brujas. |
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| 26. | | HIRIGOYEN, A.; NAVARRO-CERRILLO, R.; BAGNARA, M.; FRANCO, J.; RESQUÍN, F.; RACHID, C. Modelling taper and stem volume considering stand density in Eucalyptus grandis and Eucalyptus dunnii. i Forest - Biogeosciences and Forestry, 2021, Volume 14, Issue 2, Pages 127-136.OPEN ACCESS. DOI: https://doi.org/10.3832/ifor3604-014 Article history: Received: Jul 31, 2020 - Accepted: Jan 15, 2021. Acknowledgments: The authors thank the Instituto Nacional de Investigaciones Agropecuarias (INIAUruguay) for supporting fieldwork and the INIA Scholarship for PhD studies....| Biblioteca(s): INIA Tacuarembó. |
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| 31. | | HIRIGOYEN, A.; VARELA, B.C.; CELLINI, J.M.; ACHINELLI, F.G. Selección de modelos hipsométricos locales y generales para Eucalyptus globulus en macizos del sudeste de la provincia de Buenos Aires, Argentina. [Selection of local and general hypsometric models for Eucalyptus globulus in stands of the southeast of Buenos Aires province, Argentina]. Sección: Trabajos científicos. Revista de la Facultad de Agronomía, La Plata, 2021, Volume 120, nro. 2, pages 077-077. OPEN ACCESS. doi: https://doi.org/10.24215/16699513e077 Article history: Recepción: 13/07/2020 Aprobación: 12/04/2021. -- Autor de correspondencia: fachinel@agro.unlp.edu.ar --| Biblioteca(s): INIA Las Brujas. |
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| 33. | | HIRIGOYEN, A.; VARO-MARTINEZ, M.A.; RACHID, C.; FRANCO, J.; NAVARRO-CERRILLO, R.M. Stand characterization of eucalyptus spp. Plantations in uruguay using airborne lidar scanner technology. Remote Sensing, 1 December 2020, Volume 12, Issue 23, Article number 3947, Pages 1-19. Open Access. Doi: https://doi.org/10.3390/rs12233947 Article history: Received: 16 October 2020 / Revised: 5 November 2020 / Accepted: 21 November 2020 / Published: 2 December 2020. Acknowledgments: The authors thank the Instituto Nacional de Investigaciones Agropecuarias (INIA-Uruguay) for...| Biblioteca(s): INIA Tacuarembó. |
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| 34. | | MÁRMOL, S.; BENTANCOR, L.; FRANCIA, M.; HIRIGOYEN, A.; PÉREZ BIDEGAIN, M.; BLANCO, G.; PÉREZ, M.M. Verification of deep root exploration of Eucalyptus grandis to permian sedimentary rocks of northeastern Uruguay. [Verificación de exploración radicular profunda de Eucalyptus grandishasta rocas sedimentarias pérmicas del noreste uruguayo]. [Verificação da exploração de raízes profundas de Eucalyptus grandisaté rochas sedimentares Permianas do nordeste do Uruguai]. Agrociencia Uruguay, 2022, vol. 26, NE1, e508. https://doi.org/10.31285/AGRO.26.508 Article history: Received 19 Jan 2021, Accepted 13 Nov 2021, Published 27 May 2022.
Special issue in homage to Prof. Jorge Bossi (1934-2020). [Número especial en homenaje al Prof. Jorge Bossi].
Editores: Antonella Celio, Universidad de la...| Biblioteca(s): INIA Las Brujas. |
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| 36. | | NÚÑEZ, L.; HIRIGOYEN, A.; DURANTE, M.; ARROYO, J.; CAZZULI, F.; BREMM, C.; JAURENA, M. Qué factores controlan la proteína del forraje del campo natural?. Pasturas. Revista INIA Uruguay, Setiembre 2022, no.70, p.43-46. (Revista INIA; 70).| Biblioteca(s): INIA Las Brujas. |
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| 37. | | NÚÑEZ, L.; HIRIGOYEN, A.; DURANTE, M.; ARROYO, J.; CAZZULI, F.; BREMM, C.; JAURENA, M. What factors control the crude protein content variation of a basaltic "Campos" native grassland of South America? Agronomy, 2022, Volume 12, Issue 8, article 1756. OPEN ACCESS. doi: https://doi.org/10.3390/agronomy12081756 Article history: Received 23 June 2022; Revised 14 July 2022; Accepted 19 July 2022; Published 26 July 2022.
Academic Editors: Edward B. Rayburn, Thomas C. Griggs and Deidre D. Harmon. -- This article belongs to the Special Issue...| Biblioteca(s): INIA Las Brujas. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
10/05/2019 |
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Actualizado : |
10/05/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
GONZÁLEZ-ARCOS, M.; DE NORONHA FONSECA, M.E.; ZANDONADI, D.B.; PERES, L.E.P.; ARRUABARRENA, A.; FERREIRA, D.S.; KEVEI, Z.; MOHAREB, F.; THOMPSON, A.J.; BOITEUX, L.S. |
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Afiliación : |
MATIAS GONZÁLEZ-ARCOS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARIA ESTHER DE NORONHA FONSECA, Nacional Center for Vegetable Crops Research (CNPH) – Embrapa Vegetable Crops (Hortaliças), Brazil; DANIEL BASÍLIO ZANDONADI, Universidade Federal do Rio de Janeiro (UFRJ), Nupem, Macaé, Brazil; LÁZARO E. P. PERES, Laboratory of Hormonal Control of Plant Development, Departamento de Ciências Biológicas, Escola Superior de Agricultura Luiz de Queiroz, Universidade de São Paulo (ESALQ/USP), Piracicaba, Brazil; ANA ARRUABARRENA PASCOVICH, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; DEMETRYUS S. FERREIRA, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; ZOLTAN KEVEI, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; FADY MOHAREB, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; ANDREW J. THOMPSON, Cranfield Soil and Agrifood Institute, Cranfield University, Cranfield, UK.; LEONARDO S. BOITEUX, Nacional Center for Vegetable Crops Research (CNPH) – Embrapa Vegetable Crops (Hortaliças), Brasília, Brazil. |
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Título : |
A loss-of-function allele of a TAC1-like gene (SlTAC1) located on tomato chromosome 10 is a candidate for the Erectoid leaf (Erl) mutation. |
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Fecha de publicación : |
2019 |
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Fuente / Imprenta : |
Euphytica, 1 May 2019, Volume 215, Issue 5, Article number 95. |
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ISSN : |
0014-2336 |
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DOI : |
10.1007/s10681-019-2418-1 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 21 December 2018 / Accepted: 10 April 2019 / First Online: 16 April 2019.
This work was done in the context of MG-A doctoral studies program at the Facultad de Agronomía, Universidad de la República Oriental del Uruguay. We thank A. Manzzioni, I. Laxague and N. Zunini of INIA Salto Grande, and W. P. Dutra and A. F. Costa of Embrapa Vegetable Crops, for their assistance in conducting some of the experiments. LSB and MENF were supported by CNPq and CAPES grants. AJT and FM were supported by BBSRC Research Grant BB/ L011611/1. |
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Contenido : |
ABSTRACT.
The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-isogenic lines were also homozygous for each of the alternate alleles, reinforcing Solyc10g009320 as a strong Erl candidate gene and opening the possibility for fine-tuning manipulation of tomato architecture in breeding programs.
© 2019, Springer Nature B.V. MenosABSTRACT.
The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-... Presentar Todo |
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Palabras claves : |
Breeding; Comparative genomic analysis; Plant architecture; Resequencing; Solanum lycopersicum. |
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Thesagro : |
TOMATE. |
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Asunto categoría : |
F01 Cultivo |
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Marc : |
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100 1 $aGONZÁLEZ-ARCOS, M.
245 $aA loss-of-function allele of a TAC1-like gene (SlTAC1) located on tomato chromosome 10 is a candidate for the Erectoid leaf (Erl) mutation.$h[electronic resource]
260 $c2019
500 $aArticle history: Received: 21 December 2018 / Accepted: 10 April 2019 / First Online: 16 April 2019. This work was done in the context of MG-A doctoral studies program at the Facultad de Agronomía, Universidad de la República Oriental del Uruguay. We thank A. Manzzioni, I. Laxague and N. Zunini of INIA Salto Grande, and W. P. Dutra and A. F. Costa of Embrapa Vegetable Crops, for their assistance in conducting some of the experiments. LSB and MENF were supported by CNPq and CAPES grants. AJT and FM were supported by BBSRC Research Grant BB/ L011611/1.
520 $aABSTRACT. The genetic basis of an erectoid leaf phenotype was investigated in distinct tomato breeding populations, including one derived from Solanum lycopersicum ?LT05? (with the erectoid leaf phenotype and uniform ripening, genotype uu) × S. pimpinellifollium ?TO-937? (with the wild-type leaf phenotype and green fruit shoulder, genotype UU). The erectoid leaf phenotype was inherited as a semi-dominant trait and it co-segregated with the u allele of gene SlGLK2 (Solyc10g008160). This genomic location coincides with a previously described semi-dominant mutation named as Erectoid leaf (Erl). The genomes of ?LT05?, ?TO-937?, and three other unrelated accessions (with the wild-type Erl + allele) were resequenced with the aim of identifying candidate genes. Comparative genomic analyses, including the reference genome ?Heinz 1706? (Erl + allele), identified an Erectoid leaf-specific single nucleotide polymorphism (SNP) in the gene Solyc10g009320. This SNP caused a change of a glutamine codon (present in all the wild-type genomes) to a TAA (= ochre stop-codon) in the Erl allele, resulting in a smaller version of the predicted mutant protein (221 vs. 279 amino acids). Solyc10g009320, previously annotated as an ?unknown protein?, was identified as a TILLER ANGLE CONTROL1-like gene. Linkage between the Erl and Solyc10g009320 was confirmed via Sanger sequencing of the PCR amplicons of the two variant alleles. No recombinants were detected in 265 F 2 individuals. Contrasting S 7 near-isogenic lines were also homozygous for each of the alternate alleles, reinforcing Solyc10g009320 as a strong Erl candidate gene and opening the possibility for fine-tuning manipulation of tomato architecture in breeding programs. © 2019, Springer Nature B.V.
650 $aTOMATE
653 $aBreeding
653 $aComparative genomic analysis
653 $aPlant architecture
653 $aResequencing
653 $aSolanum lycopersicum
700 1 $aDE NORONHA FONSECA, M.E.
700 1 $aZANDONADI, D.B.
700 1 $aPERES, L.E.P.
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700 1 $aFERREIRA, D.S.
700 1 $aKEVEI, Z.
700 1 $aMOHAREB, F.
700 1 $aTHOMPSON, A.J.
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773 $tEuphytica, 1 May 2019, Volume 215, Issue 5, Article number 95.
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